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·인용수 4
·2025
Single-molecule analysis reveals that IPMK enhances the DNA-binding activity of the transcription factor SRF
Hyoungjoon Ahn, Jeongmin Yu, Kwangmin Ryu, Jaeseung Ryu, Sera Kim, J. Park, Joon-Young Kim, Inhong Jung, Hongyu An, Se-Hoon Hong, Eunha Kim, Kihyun Park, Myunghwan Ahn, Sunwoo Min, Inkyung Jung, Daeyoup Lee, Thomas Lee, Youngjoo Byun, Ji‐Joon Song, Jaehoon Kim, Won‐Ki Cho, Gwangrog Lee, Seyun Kim
IF 13.1Nucleic Acids Research
초록

Serum response factor (SRF) is a master transcription factor that regulates immediate early genes and cytoskeletal remodeling genes. Despite its importance, the mechanisms through which SRF stably associates with its cognate promoter remain unknown. Our biochemical and protein-induced fluorescence enhancement analyses showed that the binding of SRF to serum response element was significantly increased by inositol polyphosphate multikinase (IPMK), an SRF cofactor. Moreover, real-time tracking of SRF loci in live cell nuclei demonstrated that the chromatin residence time of SRF was reduced by IPMK depletion in fibroblasts. Conversely, elevated IPMK levels extended the SRF-chromatin association. We identified that IPMK binds to the intrinsically disordered region of SRF, which is required for the IPMK-induced stable interaction of SRF with DNA. IPMK-mediated conformational changes in SRF were observed by single-molecule fluorescence resonance energy transfer assays. Therefore, our findings demonstrate that IPMK is a critical factor for promoting high-affinity SRF-chromatin association and provide insights into the mechanisms of SRF-dependent transcription control via chaperone-like activity.

키워드
Serum response factorSerum Response ElementBiologyTranscription factorMolecular biologyBinding siteTranscription (linguistics)DNA-binding proteinCell biologyBiochemistry
타입
article
IF / 인용수
13.1 / 4
게재 연도
2025

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