발행물

전체 논문

62

51

PSAR: measuring multiple sequence alignment reliability by probabilistic sampling
Kim, J (Kim, Jaebum), Ma, J (Ma, Jian)
NUCLEIC ACIDS RESEARCH, 201108

52

Functional and evolutionary insights from the genomes of three parasitoid nasonia species
Werren, J.H., Richards, S., Desjardins, C.A., Niehuis, O., Gadau, J., Colbourne, J.K., Beukeboom, L.W., Desplan, C., Elsik, C.G., Grimmelikhuijzen, C.J.P., Kitts, P., Lynch, J.A., Murphy, T., Oliveira, D.C.S.G., Smith, C.D., Van Zande, L.D., Worley, K.C., Zdobnov, E.M., Aerts, M., Albert, S., Anaya, V.H., Anzola, J.M., Barchuk, A.R., Behura, S.K., Bera, A.N., Berenbaum, M.R., Bertossa, R.C., Bitondi, M.M.G., Bordenstein, S.R., Bork, P., Bornberg-Bauer, E., Brunain, M., Cazzamali, G., Chaboub, L., Chacko, J., Chavez, D., Childers, C.P., Choi, J.-H., Clark, M.E., Claudianos, C., Clinton, R.A., Cree, A.G., Cristino, A.S., Dang, P.M., Darby, A.C., De Graaf, D.C., Devreese, B., Dinh, H.H., Edwards, R., Elango, N., Elhaik, E., Ermolaeva, O., Evans, J.D., Foret, S., Fowler, G.R., Gerlach, D., Gibson, J.D., Gilbert, D.G., Graur, D., Gründer, S., Hagen, D.E., Han, Y., Hauser, F., Hultmark, D., Hunter Iv, H.C., Hurst, G.D.D., Jhangian, S.N., Jiang, H., Johnson, R.M., Jones, A.K., Junier, T., Kadowaki, T., Kamping, A., Kapustin, Y., Kechavarzi, B., Kim, J., Kiryutin, B., Koevoets, T., Kovar, C.L., Kriventseva, E.V., Kucharski, R., Lee, H., Lee, S.L., Lees, K., Lewis, L.R., Loehlin, D.W., Logsdon Jr., J.M., Lopez, J.A., Lozado, R.J., Maglott, D., Maleszka, R., Mayampurath, A., Mazur, D.J., McClure, M.A., Moore, A.D., Morgan, M.B., Muller, J., Munoz-Torres, M.C., Muzny, D.M., Nazareth, L.V., Neupert, S., Nguyen, N.B., Nunes, F.M.F., Oakeshott, J.G., Okwuonu, G.O., Pannebakker, B.A., Pejaver, V.R., Peng, Z., Pratt, S.C., Predel, R., Pu, L.-L., Ranson, H., Raychoudhury, R., Rechtsteiner, A., Reese, J.T., Reid, J.G., Riddle, M., Hugh M Robertson, I.I., Romero-Severson, J., Rosenberg, M., Sackton, T.B., Sattelle, D.B., Schlüns, H., Schmitt, T., Schneider, M., Schüler, A., Schurko, A.M., Shuker, D.M., Simões, Z.L.P., Sinha, S., Smith, Z., Solovyev, V., Souvorov, A., Springauf, A., Stafflinger, E., Stage, D.E., Stanke, M., Tanaka, Y., Telschow, A., Vattathil, C.T.S., Eveline C Verhulst, I.I., Viljakainen, L., Wanner, K.W., Waterhouse, R.M., Whitfield, J.B., Wilkes, T.E., Williamson, M., Willis, J.H., Wolschin, F., Wyder, S., Yamada, T., Yi, S.V., Zecher, C.N., Zhang, L., Gibbs, R.A.
Science, 201001

53

Functional characterization of transcription factor motifs using cross-species comparison across large evolutionary distances
Kim, J., Cunningham, R., James, B., Wyder, S., Gibson, J.D., Niehuis, O., Zdobnov, E.M., Robertson, H.M., Robinson, G.E., Werren, J.H., Sinha, S.
PLoS Computational Biology, 201001

54

Towards realistic benchmarks for multiple alignments of non-coding sequences
Kim, J., Sinha, S.
BMC Bioinformatics, 201001

55

Evolution of regulatory sequences in 12 Drosophila species
Kim, J., He, X., Sinha, S.
PLoS Genetics, 200901

56

PerRank: Personalized rank retrieval with categorical and numerical attributes
Kim, S., Kim, J., Ko, Y., Hwang, S.-W., Han, J.
Proceedings - The 9th International Conference on Web-Age Information Management, 2008

57

Indelign: a probabilistic framework for annotation of insertions and deletions in a multiple alignment
Kim, J (Kim, Jaebum), Sinha, S (Sinha, Saurabh)
BIOINFORMATICS, 200702

58

참조 유전체 기반 Y 염색체 어셈블리 향상 연구
김현지, 심미강, 권기상, 위수연, 김재범
정보과학회 컴퓨팅의 실제 논문지, 202107

59

Application of metagenome analysis to characterize the molecular diversity and saxitoxin-producing potentials of a cyanobacterial community: a case study in the North Han River, Korea
Kim, KH (Kim, Keon Hee), Yoon, Y (Yoon, Youngdae), Hong, WY (Hong, Woon-Young), Kim, J (Kim, JaeBum), Cho, YC (Cho, Yung-Chul), Hwang, SJ (Hwang, Soon-Jin)
APPLIED BIOLOGICAL CHEMISTRY, 201804

60

Evolutionary Analyses of Hanwoo (Korean Cattle)-Specific Single-Nucleotide Polymorphisms and Genes Using Whole-Genome Resequencing Data of a Hanwoo Population
Lee, D (Lee, Daehwan), Cho, M (Cho, Minah), Hong, W (Hong, Woon-young), Lim, D (Lim, Dajeong), Kim, HC (Kim, Hyung-Chul), Cho, YM (Cho, Yong-Min), Jeong, JY (Jeong, Jin-Young), Choi, BH (Choi, Bong-Hwan), Ko, Y (Ko, Younhee), Kim, J (Kim, Jaebum)
MOLECULES AND CELLS, 201609